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Rory


Arizona State University

Active since 2011

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Professional Interests: biophysics

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Question


3d skeleton from z-stack of binarized images
I have 10 10x10 um binarized images recorded in 0.1 um steps (so the volume is 10x10x1 um). The images are of entangled fibers....

10 years ago | 1 answer | 0

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answer

Question


how does mavolcanoplot calculate fold changes? (dumb question?)
I want to know how exactly the fold changes are calculated by mavolcanoplot(). It seems that the fold changes are not something ...

11 years ago | 1 answer | 0

1

answer

Answered
increase buffer limit of dataread
thanks walter i bet you are right. it turned out that my bug was not actually due to this function after all.

11 years ago | 0

Question


increase buffer limit of dataread
I am trying to use the function affygcrma() in the bioinformatics toolbox. I have the proper input arguments and followed the e...

11 years ago | 2 answers | 0

2

answers

Question


Integrative Genomics Viewer files import to matlab
Broad Institute Integrative Genomics Viewer (open source java-based) does anyone have a script/function for pulling data out...

11 years ago | 0 answers | 0

0

answers

Question


x=dir('c:\mydir') ; x(1).name = '49' ??? weird output bug
Hi all I was using the dir function to get a list of the subdirectories in a folder. Everything looks correct when I view the...

12 years ago | 0 answers | 0

0

answers

Question


errorbar on barplot of matrix of values
I have five columns and six rows of data, so that there will be six series each with 5 bars of different color: data= 1.0...

12 years ago | 3 answers | 0

3

answers

Answered
using hold on with plotyy
I also found the clear axes command 'cla' to be useful for this: I set up plotyy with two arbitrary X's an Y's, then go in and c...

12 years ago | 0

Question


using hold on with plotyy
I couldn't find an answer out there, so i'll ask: I want to plot into one axis many curves (by using a loop), using hold on. ...

12 years ago | 2 answers | 0

2

answers

Question


how to make a movie of multiple figures simultaneously using getframe
I have four 2d histograms, I have turned each into a time sequence of 1d histograms and made four movies using getframe, movie, ...

12 years ago | 1 answer | 0

1

answer